Find conserved markers within two groups — TS_FindConservedMarkers • TS

Not sure this function does what I want it to...

Usage

TS_FindConservedMarkers(
  seurat_object,
  ident.1,
  ident.2,
  grouping_variable_name = "tested_population",
  only_pos_markers = T
)

Arguments

seurat_object: Your Seurat object
ident.1: Name for cluster 1
ident.2: Name for cluster 2
grouping_variable_name: Name of the combined clusters, can be anything. Defaults to 'tested_population'.
only_pos_markers: Whether to only highlight positively upregulated markers between the grouped population and the rest. Defaults to 'TRUE'.