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A wrapper around the DEnrichRPlot from the 'Seurat' package

TS_DEenrichRPlot.Rd

A wrapper around the DEnrichRPlot from the 'Seurat' package

Usage

TS_DEenrichRPlot(
  seurat_object = get(default_seurat_object),
  ident.1 = 0,
  ident.2 = 1,
  test.use = "wilcox",
  max.genes = 500
)

Arguments

seurat_object

Your 'Seurat' object. Defaults to 'default_seurat_object'

ident.1

Name of cluster 1. Defaults to '0'

ident.2

Name of cluster 2. Defaults to '1'

test.use

The test you want to use for DE testing. Defaults to 'Wilcoxons ranked sum' test.

max.genes

The maximum number of genes to use. Defaults to 500